BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028D12LP1|AL428906
(878 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1387 1696 0.0
>3x_Contig1387
Length = 7827
Score = 1696 bits (855), Expect = 0.0
Identities = 877/881 (99%), Gaps = 3/881 (0%)
Strand = Plus / Plus
Query: 1 ccttaggcttgggtgaactgcatttagtgtatcactttttttttcccccatttttctttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1267 ccttaggcttgggtgaactgcatttagtgtatcactttttttttcccccatttttctttg 1326
Query: 61 ttttgtttcttgggaccagagttccctttgtcgttcctcaatttttgttaatactacatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1327 ttttgtttcttgggaccagagttccctttgtcgttcctcaatttttgttaatactacatt 1386
Query: 121 gtcgttgatcttcgcatttttactttatattggtatttgcggttcccaagttagttgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1387 gtcgttgatcttcgcatttttactttatattggtatttgcggttcccaagttagttgtca 1446
Query: 181 gtggtttagagtactcaaatcttgttaagatgtcactttcagagcaactgaacggctgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1447 gtggtttagagtactcaaatcttgttaagatgtcactttcagagcaactgaacggctgga 1506
Query: 241 ataccgctgtttctgacgataaggataataatacccagattgattctgaattagcatcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1507 ataccgctgtttctgacgataaggataataatacccagattgattctgaattagcatcaa 1566
Query: 301 tagtctcgtcgctttcggcactgtcaaatccgaatgtacagcaacaagcacagcagcagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1567 tagtctcgtcgctttcggcactgtcaaatccgaatgtacagcaacaagcacagcagcagg 1626
Query: 361 ttcaacagcagcaagtacaggcgcas-agcagcaacagattggtgggttcagaagggcct 419
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1627 ttcaacagcagcaagtacaggcgcagcagcagcaacagattggtgggttcagaagggcct 1686
Query: 420 ctttcaatagtaatacgggaagcgatgtggactcagagatctttttcaatacacagaatt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1687 ctttcaatagtaatacgggaagcgatgtggactcagagatctttttcaatacacagaatt 1746
Query: 480 ctcccatgttgaggagaactactctgtctgtaggcgggatgtctctgcctgagaactctt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1747 ctcccatgttgaggagaactactctgtctgtaggcgggatgtctctgcctgagaactctt 1806
Query: 540 cgtcccacgctcagaatagattgaatgccatgaaccattactctgccagtatcgctggtg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1807 cgtcccacgctcagaatagattgaatgccatgaaccattactctgccagtatcgctggtg 1866
Query: 600 gtctgacagctcaattccaaaataataataatccgaacttgaacagttacaacggaagcg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1867 gtctgacagctcaattccaaaataataataatccgaacttgaacagttacaacggaagcg 1926
Query: 660 tgactaattctaattcgatcggtgtcaataatagttcagttacatctggatttttcgaaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1927 tgactaattctaattcgatcggtgtcaataatagttcagttacatctggatttttcgaaa 1986
Query: 720 ggtttggtcgtgccttagctgagggtactcgtgaagtggaattgaatgtgggtgtgggta 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1987 ggtttggtcgtgccttagctgagggtactcgtgaagtggaattgaatgtgggtgtgggta 2046
Query: 780 gtg-taacgttggtggg-ctccttcgagttcgaatcacgctggtactggctcgagaagag 837
||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2047 gtgttaacgttggtgggcctccttcgagttcgaatcacgctggtactggctcgagaagag 2106
Query: 838 catctgcaaccacaggcttggagcatttatcgagagtcgga 878
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 2107 catctgcaaccacaggcttggagcatttatcgagagtcgga 2147
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6925
Number of Sequences: 1807
Number of extensions: 6925
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 878
length of database: 10,358,551
effective HSP length: 16
effective length of query: 862
effective length of database: 10,329,639
effective search space: 8904148818
effective search space used: 8904148818
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)